Human Tumor-Infiltrating MAIT Cells Display Hallmarks of Bacterial Antigen Recognition in Colorectal Cancer
Cell Reports Medicine (2020)
Large-Scale HLA Tetramer Tracking of T Cells during Dengue Infection Reveals Broad Acute Activation and Differentiation into Two Memory Cell Fates
Late-differentiated effector neoantigen-specific CD8+ T cells are enriched in peripheral blood of non-small cell lung carcinoma patients responding to atezolizumab treatment
J Immunother Cancer. (2019)
Dimensionality reduction for visualizing single-cell data using UMAP
Nature Biotechnology volume37, pages38–44 (2019)
Multifactorial heterogeneity of virus-specific T cells and association with the progression of human chronic hepatitis B infection
Science Immunology (2019)
Multiplex peptide-MHC tetramer staining using mass cytometry for deep analysis of the influenza-specific T-cell response in mice
J Immunological Methods (2018)
Bystander CD8+ T cells are abundant and phenotypically distinct in human tumour infiltrates
Human Innate Lymphoid Cell Subsets Possess Tissue-Type Based Heterogeneity in Phenotype and Frequency
Immunity 46, 1 (2017)
Checkpoint blockade immunotherapy reshapes the high-dimensional phenotypic heterogeneity of murine intratumoural neoantigen-specific CD8+ T cells
Nature Communications 8, 562 (2017)
Categorical Analysis of Human T Cell Heterogeneity with One-Dimensional Soli-Expression by Nonlinear Stochastic Embedding.
J Immunol. 196, 924 (2016)
Deep Profiling Human T Cell Heterogeneity by Mass Cytometry.
Adv Immunol. 131, 101 (2016)
Mass cytometry: blessed with the curse of dimensionality
Nat Immunol. 17, 890 (2016)
A High-Dimensional Atlas of Human T Cell Diversity Reveals Tissue-Specific Trafficking and Cytokine Signatures.
Immunity 45, 442 (2016)
Mapping the Diversity of Follicular Helper T Cells in Human Blood and Tonsils Using High-Dimensional Mass Cytometry Analysis.
Cell Reports 11, 1822 (2015)
Beyond model antigens: high-dimensional methods for the analysis of antigen-specific T cells
Nat Biotechnol. 32,149 (2014)
High-dimensional analysis of the murine myeloid cell system.
Nat Immunol. 15, 1181 (2014)
Combinatorial tetramer staining and mass cytometry analysis facilitate T-cell epitope mapping and characterization.
Nat Biotechnol 31, 623 (2013)
Interrogating the repertoire: broadening the scope of peptide-MHC multimer analysis.
Nat Rev Immunol 11, 551 (2011)
Simultaneous detection of many T-cell specificities using combinatorial tetramer staining.
Nat Methods 6, 497-499 (2009)